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WND1B protein (Populus trichocarpa) - STRING interaction network
"WND1B" - NAC domain protein, IPR003441Wood-associated NAC domain transcription factor 1B [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
WND1BNAC domain protein, IPR003441Wood-associated NAC domain transcription factor 1B [source-UniProtKB/TrEMBL;Acc-B9GIS7_POPTR] (418 aa)    
Predicted Functional Partners:
POPTR_0009s05860.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9HNW3_POPTR] (321 aa)
     
   
  0.846
POPTR_0001s27430.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9GFE8_POPTR] (327 aa)
     
   
  0.591
POPTR_0001s26590.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9GF09_POPTR] (281 aa)
           
  0.574
GT43B
Glycosyl transferase (357 aa)
     
   
  0.568
POPTR_0007s01350.1
NAC domain protein, IPR003441 [source-UniProtKB/TrEMBL;Acc-B9HGS2_POPTR] (298 aa)
     
   
  0.554
MYB20
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9HNP3_POPTR] (333 aa)
     
   
  0.551
POPTR_0007s08190.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9HGV5_POPTR] (367 aa)
           
  0.529
POPTR_0005s09930.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9H624_POPTR] (367 aa)
           
  0.529
GT43A
Glycosyl transferase (359 aa)
           
  0.503
POPTR_0015s14600.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9ICU5_POPTR] (274 aa)
     
   
  0.493
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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