STRINGSTRING
POPTR_0001s45520.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s45520.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s45520.1Uncharacterized protein (448 aa)    
Predicted Functional Partners:
POPTR_0006s07650.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PFS8_POPTR] (1188 aa)
   
   
  0.502
POPTR_1020s00210.1
Uncharacterized protein (403 aa)
   
   
  0.483
POPTR_1020s00200.1
Uncharacterized protein (389 aa)
   
   
  0.483
POPTR_0003s21540.1
Metal tolerance protein [source-UniProtKB/TrEMBL;Acc-B9GYJ2_POPTR] (401 aa)
   
   
  0.483
POPTR_0001s04750.1
Metal tolerance protein [source-UniProtKB/TrEMBL;Acc-B9GLJ8_POPTR] (437 aa)
   
   
  0.483
POPTR_0001s04740.1
Metal tolerance protein [source-UniProtKB/TrEMBL;Acc-B9GLJ7_POPTR] (403 aa)
   
   
  0.483
POPTR_0010s25780.1
Metal tolerance protein [source-UniProtKB/TrEMBL;Acc-B9HV32_POPTR] (459 aa)
   
   
  0.470
POPTR_0001s16050.1
ZIP transporter (150 aa)
     
   
  0.459
MTP11.1
Metal tolerance proteinMn-specific cation diffusion facilitator transporter [source-UniProtKB/TrEMBL;Acc-A4ZUV2_POPTR] (394 aa)
   
   
  0.453
POPTR_0008s04940.1
Metal tolerance proteinMn-specific cation diffusion facilitator transporter [source-UniProtKB/TrEMBL;Acc-A4ZUV3_POPTR] (394 aa)
   
   
  0.453
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
Server load: low (8%) [HD]