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POPTR_0001s46010.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s46010.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s46010.1Predicted protein (181 aa)    
Predicted Functional Partners:
POPTR_0008s19930.1
Predicted protein (376 aa)
           
  0.495
POPTR_0001s23820.1
Predicted protein (146 aa)
           
  0.495
POPTR_0015s12060.1
Predicted protein (166 aa)
           
  0.495
POPTR_0012s11280.1
Predicted protein (180 aa)
           
  0.495
POPTR_0009s15770.1
Predicted protein (330 aa)
           
  0.495
POPTR_0008s06980.1
2-oxoglutarate-dependent dioxygenase [source-UniProtKB/TrEMBL;Acc-B9HHR0_POPTR] (357 aa)
           
  0.495
POPTR_0001s38880.1
Integral membrane single C2 domain protein [source-UniProtKB/TrEMBL;Acc-B9GGX9_POPTR] (729 aa)
           
  0.495
POPTR_0012s07040.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PFW0_POPTR] (180 aa)
     
        0.465
POPTR_0014s16530.1
Predicted protein (118 aa)
     
        0.450
POPTR_0009s17030.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEP3_POPTR]; Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate) (448 aa)
           
  0.426
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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