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POPTR_0001s46740.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s46740.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s46740.1Uncharacterized protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family (406 aa)    
Predicted Functional Partners:
POPTR_0018s06060.1
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family (414 aa)
         
  0.680
PRX90
Peroxidase; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (328 aa)
     
 
  0.674
PRX59
Peroxidase; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (341 aa)
     
 
  0.671
POPTR_0008s11000.1
Peroxidase; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (312 aa)
     
 
  0.671
PRX88
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (323 aa)
     
 
  0.663
POPTR_0005s09170.1
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (297 aa)
     
 
  0.663
POPTR_0001s33680.1
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress (315 aa)
     
 
  0.663
POPTR_0010s18250.1
Peroxidase; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (336 aa)
     
 
    0.655
PRX19
Peroxidase; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (400 aa)
     
 
    0.655
POPTR_0009s10960.1
Peroxidase; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (301 aa)
     
 
    0.652
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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