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POPTR_0001s46930.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s46930.1" - Histidine phosphotransfer protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s46930.1Histidine phosphotransfer protein (147 aa)    
Predicted Functional Partners:
CRE1B
Cytokinin response 1 family protein; Cytokinin receptor 1BHistidine kinase cytokinin receptor [source-UniProtKB/TrEMBL;Acc-B9HVS3_POPTR] (1006 aa)
       
  0.872
POPTR_0010s00320.1
Two-component response regulator ARR2 family protein; Type-b response regulator (634 aa)
       
  0.834
POPTR_0018s11960.1
Uncharacterized protein; Type-b response regulator (707 aa)
       
  0.818
POPTR_0018s10280.1
Uncharacterized protein; Type-b response regulator (517 aa)
       
  0.818
POPTR_0008s22990.1
Two-component response regulator; Transcriptional activator that binds specific DNA sequence (670 aa)
       
  0.787
POPTR_0008s13490.1
Two-component response regulator; Transcriptional activator that binds specific DNA sequence (671 aa)
       
  0.787
PHK4
Histidine kinase cytokinin receptor [source-UniProtKB/TrEMBL;Acc-B9GZP2_POPTR] (1029 aa)
       
  0.769
HK3A
Histidine kinase 3AHistidine kinase cytokinin receptor [source-UniProtKB/TrEMBL;Acc-B9GML7_POPTR] (1020 aa)
       
  0.769
POPTR_0157s00200.1
annotation not available (178 aa)
     
 
  0.736
POPTR_0018s03320.1
annotation not available (1012 aa)
     
 
  0.736
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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