Genes that are sometimes fused into single open reading frames.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Kinase family protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (1095 aa)
Predicted Functional Partners:
annotation not available (164 aa)
Uncharacterized protein (123 aa)
Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family (480 aa)
Uncharacterized protein (368 aa)
Uncharacterized protein (359 aa)
SAUR family protein [source-UniProtKB/TrEMBL;Acc-B9HRE1_POPTR] (146 aa)
SAUR family protein [source-UniProtKB/TrEMBL;Acc-B9H4U8_POPTR] (149 aa)
SAUR family protein [source-UniProtKB/TrEMBL;Acc-B9H0Z5_POPTR] (145 aa)
Putative uncharacterized proteinSAUR family protein [source-UniProtKB/TrEMBL;Acc-A9P7Y9_POPTR] (149 aa)
Uncharacterized protein; GRAS family transcription factor [source-UniProtKB/TrEMBL;Acc-B9IAQ7_POPTR]; Belongs to the GRAS family (547 aa)
Your Current Organism:
NCBI taxonomy Id: 3694 Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar