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POPTR_0001s47150.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s47150.1" - Kinase family protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s47150.1Kinase family protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (1095 aa)    
Predicted Functional Partners:
POPTR_0010s17640.1
annotation not available (164 aa)
       
 
  0.678
POPTR_0008s08570.1
Uncharacterized protein (123 aa)
       
 
  0.678
POPTR_0009s08030.1
Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family (480 aa)
           
  0.590
POPTR_0015s05690.1
Uncharacterized protein (368 aa)
           
  0.589
POPTR_0012s00970.1
Uncharacterized protein (359 aa)
           
  0.589
SAUR37
SAUR family protein [source-UniProtKB/TrEMBL;Acc-B9HRE1_POPTR] (146 aa)
           
  0.589
SAUR38
SAUR family protein [source-UniProtKB/TrEMBL;Acc-B9H4U8_POPTR] (149 aa)
           
  0.589
SAUR36
SAUR family protein [source-UniProtKB/TrEMBL;Acc-B9H0Z5_POPTR] (145 aa)
           
  0.589
SAUR39
Putative uncharacterized proteinSAUR family protein [source-UniProtKB/TrEMBL;Acc-A9P7Y9_POPTR] (149 aa)
           
  0.589
GRAS54
Uncharacterized protein; GRAS family transcription factor [source-UniProtKB/TrEMBL;Acc-B9IAQ7_POPTR]; Belongs to the GRAS family (547 aa)
           
  0.574
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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