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POPTR_0001s47700.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s47700.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s47700.1Predicted protein (752 aa)    
Predicted Functional Partners:
POPTR_0015s08730.1
Hypothetical protein (528 aa)
     
  0.996
POPTR_0012s08220.1
Predicted protein (357 aa)
     
  0.995
POPTR_0004s05630.1
Predicted protein (318 aa)
     
  0.994
POPTR_0011s07330.1
Predicted protein (212 aa)
     
  0.991
POPTR_0009s04560.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
       
      0.917
POPTR_0001s25490.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
       
      0.917
POPTR_0019s03680.1
Predicted protein; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (388 aa)
     
 
  0.857
POPTR_0013s04500.1
Predicted protein; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
     
 
  0.857
POPTR_0006s23860.1
Predicted protein (404 aa)
     
 
  0.840
POPTR_0009s05240.1
Predicted protein (401 aa)
     
 
  0.814
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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