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POPTR_0001s47720.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0001s47720.1" - GRAS family transcription factor LATERAL [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0001s47720.1GRAS family transcription factor LATERAL [source-UniProtKB/TrEMBL;Acc-B9GHZ4_POPTR] (438 aa)    
Predicted Functional Partners:
POPTR_0014s05590.1
Predicted protein (600 aa)
           
  0.459
POPTR_0007s14130.1
WUS protein [source-UniProtKB/TrEMBL;Acc-A0AAS8_POPTR] (264 aa)
           
  0.424
POPTR_0005s27720.1
NAC domain protein, IPR003441 [source-UniProtKB/TrEMBL;Acc-B9H5V7_POPTR] (385 aa)
           
  0.424
POPTR_0005s11680.1
Predicted protein (264 aa)
           
  0.424
POPTR_0002s00730.1
NAC domain protein, IPR003441 [source-UniProtKB/TrEMBL;Acc-B9GPP5_POPTR] (403 aa)
           
  0.424
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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