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POPTR_0002s05300.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s05300.1" - Copalyl diphosphate synthase [source:UniProtKB/TrEMBL in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s05300.1Copalyl diphosphate synthase [source-UniProtKB/TrEMBL;Acc-B9GSM9_POPTR] (795 aa)    
Predicted Functional Partners:
POPTR_0008s08190.1
Uncharacterized protein (564 aa)
     
 
0.922
POPTR_0008s08220.1
Ent-kaurene synthase [source-UniProtKB/TrEMBL;Acc-B9HI37_POPTR] (730 aa)
     
 
0.918
POPTR_0010s18090.1
Uncharacterized protein (245 aa)
         
 
0.900
POPTR_0004s04090.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002305113.1] (216 aa)
         
    0.900
POPTR_0004s03810.1
Hypothetical protein (833 aa)
         
 
0.900
POPTR_0004s08970.1
Predicted protein (365 aa)
     
 
    0.812
POPTR_0015s07380.1
Uncharacterized protein (231 aa)
         
    0.800
POPTR_0015s04050.1
Predicted protein (312 aa)
         
    0.800
POPTR_0012s07060.1
Predicted protein (470 aa)
         
    0.800
POPTR_0011s10270.1
Uncharacterized protein (261 aa)
         
    0.800
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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