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POPTR_0002s05600.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s05600.1" - Protein DETOXIFICATION in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s05600.1Protein DETOXIFICATION; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (503 aa)    
Predicted Functional Partners:
POPTR_0001s16150.1
Plasma membrane ATPase; Autoinhibited H+ ATPase (950 aa)
           
  0.798
POPTR_0017s02090.1
Putative glutathione S-transferase family protein; Belongs to the GST superfamily (214 aa)
     
   
  0.742
POPTR_0002s09840.1
Uncharacterized protein (208 aa)
           
  0.741
F3H1
Uncharacterized protein; Flavonoid 3’-hydroxylase [source-UniProtKB/TrEMBL;Acc-B9I6R6_POPTR]; Belongs to the cytochrome P450 family (521 aa)
     
   
  0.683
CHI1
Chalcone isomerasePutative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PE73_POPTR]; Belongs to the chalcone isomerase family (223 aa)
     
   
  0.657
POPTR_1289s00200.1
annotation not available (220 aa)
   
     
  0.651
DFR2
Uncharacterized protein; Dihydroflavonol 4-reductase [source-UniProtKB/TrEMBL;Acc-B9H4D5_POPTR] (376 aa)
     
   
  0.642
DFR1
Dihydroflavonol 4-reductase [source-UniProtKB/TrEMBL;Acc-B9GRL5_POPTR] (346 aa)
     
   
  0.642
ANR/BAN1
Anthocyanidin reductasePutative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGB9_POPTR] (335 aa)
     
   
  0.635
ANR/BAN2
Leucoanthocyanidin reductase family protein; Anthocyanidin reductase [source-UniProtKB/TrEMBL;Acc-B9HYU1_POPTR] (335 aa)
           
  0.622
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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