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POPTR_0002s05630.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s05630.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s05630.1Predicted protein (530 aa)    
Predicted Functional Partners:
POPTR_0010s12080.1
DELLA domain GRAS family transcription factor GAI/RGA1 [source-UniProtKB/TrEMBL;Acc-B9HW49_POPTR] (602 aa)
       
  0.834
POPTR_0008s13090.1
DELLA domain GRAS family transcription factor, GA insensitive (GAI), GA1-3 1 (RGA1) repressor protein [source-UniProtKB/TrEMBL;Acc-B9HJD2_POPTR] (600 aa)
       
  0.834
POPTR_0005s14540.1
DELLA domain GRAS family transcription factor rga-like protein [source-UniProtKB/TrEMBL;Acc-B9GV61_POPTR] (619 aa)
       
  0.834
POPTR_0004s08890.1
DELLA domain GRAS family transcription factor [source-UniProtKB/TrEMBL;Acc-B9H380_POPTR] (607 aa)
       
  0.834
POPTR_0017s09470.1
Uncharacterized protein (378 aa)
         
    0.800
POPTR_0017s05010.1
GRAS domain protein [source-UniProtKB/TrEMBL;Acc-B9GM65_POPTR] (387 aa)
         
    0.800
POPTR_0017s01030.1
Predicted protein (381 aa)
         
    0.800
POPTR_0016s02720.1
GRAS domain protein [source-UniProtKB/TrEMBL;Acc-B9P6F4_POPTR] (362 aa)
         
    0.800
POPTR_0016s02700.1
GRAS family transcription factor [source-UniProtKB/TrEMBL;Acc-B9IHI4_POPTR] (355 aa)
         
    0.800
POPTR_0016s02670.1
Uncharacterized protein (371 aa)
         
    0.800
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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