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POPTR_0002s06290.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s06290.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
POPTR_0002s06290.1Predicted protein; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (300 aa)    
Predicted Functional Partners:
POPTR_0011s00300.1
Predicted protein (155 aa)
     
  0.981
POPTR_0004s10030.1
Nadph-cytochrome P450 oxydoreductase [source-UniProtKB/TrEMBL;Acc-B9H2Y5_POPTR] (460 aa)
     
  0.981
POPTR_0004s04220.1
Glutaredoxin S17 (PtrcGrx_S17.2), mRNA [source-RefSeq DNA_predicted;Acc-XM_002305767.1] (437 aa)
     
 
  0.969
POPTR_0016s12670.1
Glutaredoxin S16 [source-UniProtKB/TrEMBL;Acc-B9IGC0_POPTR] (212 aa)
       
 
  0.928
POPTR_0014s13760.1
Glutaredoxin [source-UniProtKB/TrEMBL;Acc-B9IA39_POPTR] (172 aa)
       
 
  0.928
POPTR_0011s05110.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PES4_POPTR] (454 aa)
       
 
  0.928
POPTR_0003s05940.1
Glutaredoxin S15 [source-UniProtKB/TrEMBL;Acc-B9GWE2_POPTR] (172 aa)
       
 
  0.928
POPTR_0017s08450.1
Predicted protein (801 aa)
     
      0.927
POPTR_0001s32490.1
Predicted protein (805 aa)
     
      0.927
POPTR_0018s09980.1
Predicted protein; This enzyme is required for electron transfer from NADP to cytochrome P450 (712 aa)
     
  0.898
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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