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POPTR_0002s07010.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s07010.1" - Hypothetical protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s07010.1Hypothetical protein (231 aa)    
Predicted Functional Partners:
POPTR_0009s07050.1
Predicted protein (371 aa)
       
 
  0.698
POPTR_0009s11820.1
Predicted protein (377 aa)
       
      0.603
POPTR_0004s16110.1
Predicted protein (377 aa)
       
      0.603
POPTR_0005s23810.1
Histone 2 [source-UniProtKB/TrEMBL;Acc-A9PG14_POPTR] (139 aa)
       
 
  0.570
POPTR_0002s04720.1
Histone 2 [source-UniProtKB/TrEMBL;Acc-A9P990_POPTR] (137 aa)
       
 
  0.570
POPTR_0014s02810.1
Predicted protein (407 aa)
           
  0.563
POPTR_0009s10400.1
Predicted protein (424 aa)
           
  0.563
ABF2-1
Abscisic acid responsive elements-binding protein 2 [source-UniProtKB/TrEMBL;Acc-A3FM74_POPTR] (433 aa)
           
  0.563
POPTR_0002s12710.1
Predicted protein (456 aa)
           
  0.563
POPTR_0002s07030.1
Cytochrome P450 [source-UniProtKB/TrEMBL;Acc-B9GTK3_POPTR] (460 aa)
           
  0.563
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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