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POPTR_0002s09200.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s09200.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
POPTR_0002s09200.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P842_POPTR] (434 aa)    
Predicted Functional Partners:
POPTR_0003s11300.1
Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (782 aa)
           
  0.660
POPTR_0015s06530.1
Uncharacterized protein (313 aa)
           
  0.595
POPTR_0010s14480.1
Uncharacterized protein (308 aa)
           
  0.595
POPTR_0008s11300.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHZ0_POPTR] (308 aa)
           
  0.595
POPTR_0003s00500.1
Uncharacterized protein (90 aa)
           
  0.575
POPTR_0010s13400.1
Zinc finger family protein (285 aa)
           
  0.414
POPTR_0008s12020.1
Uncharacterized protein (165 aa)
           
  0.414
POPTR_0008s12010.1
annotation not available (127 aa)
           
  0.414
POPTR_0009s10460.1
Uncharacterized protein (279 aa)
           
  0.414
POPTR_0004s14830.1
Longevity assurance gene1 homolog 2 family protein (287 aa)
           
  0.414
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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