STRINGSTRING
POPTR_0002s11460.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s11460.1" - 1-aminocyclopropane-1-carboxylate [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s11460.11-aminocyclopropane-1-carboxylate [source-UniProtKB/TrEMBL;Acc-B9GNK7_POPTR] (409 aa)    
Predicted Functional Partners:
POPTR_0274s00200.1
Uncharacterized protein (392 aa)
       
  0.933
METK1
S-adenosylmethionine synthase 1 [source-UniProtKB/Swiss-Prot;Acc-METK1_POPTR]; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (392 aa)
       
  0.933
METK2
S-adenosylmethionine synthase 2 [source-UniProtKB/Swiss-Prot;Acc-METK2_POPTR]; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (393 aa)
       
  0.933
POPTR_0010s16330.1
S-adenosylmethionine synthetase 3 [source-UniProtKB/TrEMBL;Acc-B9HXH1_POPTR]; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (395 aa)
       
  0.933
METK3
S-adenosylmethionine synthase 3 [source-UniProtKB/Swiss-Prot;Acc-METK3_POPTR]; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (408 aa)
       
  0.933
METK4
S-adenosylmethionine synthase 4 [source-UniProtKB/Swiss-Prot;Acc-METK4_POPTR]; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (390 aa)
       
  0.933
POPTR_0015s01950.1
Predicted protein (2228 aa)
   
  0.932
POPTR_0012s01860.1
Predicted protein (2230 aa)
   
  0.932
POPTR_0019s10040.1
Predicted protein (864 aa)
   
  0.923
POPTR_0013s10510.1
Predicted protein (922 aa)
   
  0.923
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
Server load: low (10%) [HD]