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POPTR_0002s12550.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s12550.1" - AP2/ERF domain-containing transcription factorRAP2-like protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s12550.1AP2/ERF domain-containing transcription factorRAP2-like protein [source-UniProtKB/TrEMBL;Acc-A9PL98_POPTR] (146 aa)    
Predicted Functional Partners:
POPTR_0019s08430.1
Predicted protein; Potassium transporter (793 aa)
           
  0.511
POPTR_0015s05040.1
Predicted protein; Potassium transporter (757 aa)
           
  0.511
POPTR_0014s12700.1
Predicted protein; Potassium transporter (774 aa)
           
  0.511
POPTR_0013s08110.1
Predicted protein; Potassium transporter (792 aa)
           
  0.511
POPTR_0010s10450.1
Predicted protein; Potassium transporter (847 aa)
           
  0.511
POPTR_0001s21310.1
Predicted protein; Potassium transporter (860 aa)
           
  0.511
POPTR_0001s12790.1
Predicted protein; Potassium transporter (786 aa)
           
  0.511
POPTR_0001s03680.1
Predicted protein; Potassium transporter (792 aa)
           
  0.511
POPTR_0018s02210.1
Predicted protein (426 aa)
           
  0.426
POPTR_0010s10440.1
Predicted protein; Potassium transporter (780 aa)
           
  0.426
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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