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POPTR_0002s12760.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s12760.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s12760.1Predicted protein (249 aa)    
Predicted Functional Partners:
POPTR_0002s18650.1
Uncharacterized protein (233 aa)
     
 
  0.717
POPTR_0002s18630.1
Predicted protein (504 aa)
     
 
  0.717
POPTR_0007s08410.1
Predicted protein; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
       
      0.600
POPTR_0008s10960.1
Predicted protein (155 aa)
     
      0.599
POPTR_0002s03780.1
Predicted protein (64 aa)
       
      0.599
LIP1P-2
Lipoyl synthase 2, chloroplastic [source-UniProtKB/Swiss-Prot;Acc-LISC2_POPTR]; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (397 aa)
   
   
  0.595
LIP1P-1
Lipoyl synthase 1, chloroplastic [source-UniProtKB/Swiss-Prot;Acc-LISC1_POPTR]; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (376 aa)
   
   
  0.595
POPTR_0007s06900.1
Uncharacterized protein (385 aa)
   
   
  0.595
LIP1
Lipoyl synthase, mitochondrial [source-UniProtKB/Swiss-Prot;Acc-LIAS_POPTR]; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives (385 aa)
   
   
  0.595
POPTR_0005s09660.1
Predicted protein (387 aa)
       
 
  0.567
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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