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POPTR_0002s13660.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s13660.1" - Predicted protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s13660.1Predicted protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (122 aa)    
Predicted Functional Partners:
POPTR_0015s06500.1
Predicted protein (107 aa)
     
  0.999
POPTR_0012s05350.1
Predicted protein (107 aa)
     
  0.999
POPTR_0009s12750.1
Predicted protein (116 aa)
     
  0.989
POPTR_0004s16990.1
Predicted protein (119 aa)
     
  0.989
POPTR_0001s06710.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PBX8_POPTR] (136 aa)
     
  0.988
POPTR_0007s14910.1
Predicted protein (159 aa)
     
    0.987
POPTR_0002s11860.1
Predicted protein (149 aa)
     
    0.987
POPTR_0010s02690.1
Predicted protein (107 aa)
     
  0.984
POPTR_0008s20110.1
Predicted protein (107 aa)
     
  0.984
POPTR_0013s07910.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PCJ8_POPTR] (57 aa)
     
  0.983
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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