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POPTR_0002s15190.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s15190.1" - Integral membrane single C2 domain protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s15190.1Integral membrane single C2 domain protein [source-UniProtKB/TrEMBL;Acc-B9GPS3_POPTR] (500 aa)    
Predicted Functional Partners:
POPTR_0010s23080.1
Predicted protein (544 aa)
         
0.600
POPTR_0008s03820.1
Predicted protein (547 aa)
         
0.600
POPTR_0004s18050.1
Plant synaptotagmin [source-UniProtKB/TrEMBL;Acc-B9H193_POPTR] (558 aa)
     
 
0.583
POPTR_0009s11480.1
Putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [source-UniProtKB/TrEMBL;Acc-B3GEM6_POPTR] (460 aa)
           
  0.580
POPTR_0004s15760.1
Predicted protein (460 aa)
           
  0.580
POPTR_0009s13660.1
Plant synaptotagmin [source-UniProtKB/TrEMBL;Acc-B9HR67_POPTR] (523 aa)
     
 
0.573
POPTR_0005s26310.1
Plant synaptotagmin [source-UniProtKB/TrEMBL;Acc-B9H501_POPTR] (537 aa)
     
 
0.572
POPTR_0015s03710.1
Plant synaptotagmin [source-UniProtKB/TrEMBL;Acc-B9IE39_POPTR] (657 aa)
           
  0.524
POPTR_0012s05250.1
Plant synaptotagmin (NTMC2T3.1), mRNA [source-RefSeq DNA_predicted;Acc-XM_002317876.1] (760 aa)
           
  0.524
POPTR_0017s04290.1
Predicted protein (399 aa)
       
  0.521
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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