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POPTR_0002s16550.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s16550.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s16550.1Predicted protein (280 aa)    
Predicted Functional Partners:
POPTR_0009s04560.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
 
  0.893
POPTR_0001s25490.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
 
  0.893
POPTR_0007s06510.1
Predicted protein (1275 aa)
         
  0.742
POPTR_0005s08570.1
Predicted protein (1107 aa)
         
  0.742
POPTR_0003s15220.1
Predicted protein (584 aa)
     
      0.613
POPTR_0016s08640.1
Predicted protein (1545 aa)
     
 
    0.573
POPTR_0009s13670.1
Predicted protein (1895 aa)
     
 
    0.573
POPTR_0006s13410.1
Predicted protein (1574 aa)
     
 
    0.573
POPTR_0004s18060.1
Predicted protein (1877 aa)
     
 
    0.573
POPTR_0007s06940.1
Predicted protein (1193 aa)
       
  0.503
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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