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POPTR_0002s17350.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s17350.1" - Auxin response factor in Populus trichocarpa
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
POPTR_0002s17350.1Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (686 aa)    
Predicted Functional Partners:
POPTR_0001s17780.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002299590.1]; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (150 aa)
       
  0.991
POPTR_0003s05560.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (184 aa)
       
0.991
POPTR_0010s07570.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PCE3_POPTR]; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (303 aa)
       
0.991
POPTR_0008s17220.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (282 aa)
       
0.991
POPTR_0010s12990.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (160 aa)
       
  0.986
POPTR_0002s10880.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (366 aa)
       
  0.986
POPTR_0003s04650.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (338 aa)
       
0.983
POPTR_0001s19120.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (336 aa)
       
0.983
POPTR_0006s27130.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (229 aa)
       
0.980
POPTR_0006s16640.1
Predicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (307 aa)
       
  0.968
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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