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POPTR_0002s20750.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s20750.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s20750.1Uncharacterized protein (234 aa)    
Predicted Functional Partners:
POPTR_0006s14770.1
Uncharacterized protein (1122 aa)
           
  0.741
POPTR_0014s12510.1
Transducin family protein (378 aa)
           
  0.675
POPTR_0002s20710.1
Transducin family protein (384 aa)
           
  0.675
POPTR_0009s16040.1
Uncharacterized protein (230 aa)
           
  0.650
POPTR_0004s20750.1
Uncharacterized protein (228 aa)
           
  0.650
POPTR_0011s12040.1
Uncharacterized protein (619 aa)
           
  0.621
POPTR_0007s12070.1
O2 evolving complex 33kD family protein (332 aa)
           
  0.621
POPTR_0005s13860.1
O2 evolving complex 33kD family protein (331 aa)
           
  0.621
POPTR_0001s41010.1
PROTON PUMP INTERACTOR 1 family protein (603 aa)
           
  0.621
POPTR_0013s06070.1
Uncharacterized protein (233 aa)
           
  0.601
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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