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POPTR_0002s21700.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s21700.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Databases
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[Homology]
Score
POPTR_0002s21700.1Predicted protein (470 aa)    
Predicted Functional Partners:
POPTR_0003s05510.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGM0_POPTR] (517 aa)
       
      0.602
POPTR_0001s17930.1
Predicted protein (469 aa)
       
      0.602
POPTR_0014s15590.1
Glycosyl hydrolase family 9 (528 aa)
     
   
  0.564
POPTR_0010s19400.1
Predicted protein (259 aa)
           
  0.560
POPTR_0008s07090.1
Predicted protein (259 aa)
           
  0.560
POPTR_0010s19420.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1705 aa)
           
  0.478
POPTR_0008s07070.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1705 aa)
           
  0.478
POPTR_0009s07740.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1690 aa)
           
  0.424
POPTR_0001s28540.1
Predicted protein; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1810 aa)
           
  0.424
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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