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POPTR_0002s23310.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s23310.1" - Oxidoreductase family protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s23310.1Oxidoreductase family protein (287 aa)    
Predicted Functional Partners:
POPTR_0006s23940.1
Phytanoyl-CoA dioxygenase family protein (282 aa)
           
  0.967
POPTR_0018s09190.1
Uncharacterized protein (1082 aa)
     
        0.863
POPTR_0004s10500.1
Uncharacterized protein (739 aa)
     
   
  0.860
GH9C3
Endo-1,4-beta-glucanase; Glycosyl hydrolase family 9; Belongs to the glycosyl hydrolase 9 (cellulase E) family (611 aa)
           
  0.818
POPTR_0014s04390.1
Uncharacterized protein (199 aa)
           
  0.798
POPTR_0015s07550.1
Fis1 family protein (567 aa)
     
   
  0.744
LAR2
Uncharacterized protein; Leucocyanidin reductase [source-UniProtKB/TrEMBL;Acc-B9HWM1_POPTR] (362 aa)
           
  0.738
POPTR_0001s18510.1
annotation not available (198 aa)
           
  0.738
LAR3
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGN0_POPTR] (349 aa)
           
  0.737
LAR1
Uncharacterized protein; Leucoanthocyanidin reductase [source-UniProtKB/TrEMBL;Acc-B9HIY6_POPTR] (352 aa)
           
  0.737
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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