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POPTR_0002s24090.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s24090.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s24090.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PER9_POPTR] (544 aa)    
Predicted Functional Partners:
POPTR_0008s15290.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGY7_POPTR] (521 aa)
     
   
0.916
POPTR_0001s17070.1
Hydroxyproline-rich glycoprotein (854 aa)
     
      0.847
POPTR_0003s06200.1
Predicted protein (858 aa)
       
      0.843
POPTR_0010s11980.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PDE5_POPTR] (215 aa)
           
  0.527
POPTR_0008s13170.1
High mobility group family [source-UniProtKB/TrEMBL;Acc-B9HJD9_POPTR] (207 aa)
           
  0.527
POPTR_0006s15970.1
Predicted protein (316 aa)
           
  0.424
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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