STRINGSTRING
POPTR_0002s24360.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s24360.1" - Kip-related cyclin-dependent kinase inhibitor 3 [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s24360.1Kip-related cyclin-dependent kinase inhibitor 3 [source-UniProtKB/TrEMBL;Acc-B9GQH5_POPTR] (223 aa)    
Predicted Functional Partners:
POPTR_0004s14080.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PBQ5_POPTR] (294 aa)
       
 
  0.979
POPTR_0019s14110.1
D6-type cyclinPredicted protein [source-UniProtKB/TrEMBL;Acc-A8Y921_POPTR] (324 aa)
       
 
  0.961
POPTR_0004s22710.1
Putative uncharacterized proteinRegulatory subunit of cyclin-dependent kinase [source-UniProtKB/TrEMBL;Acc-A9PE37_POPTR]; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (129 aa)
       
 
  0.960
POPTR_0303s00210.1
Predicted protein (344 aa)
       
      0.958
POPTR_0015s10660.1
Chromatin remodeling complex subunit [source-UniProtKB/TrEMBL;Acc-B9IFA0_POPTR] (538 aa)
       
      0.958
POPTR_0012s09870.1
Chromatin remodeling complex subunit [source-UniProtKB/TrEMBL;Acc-B9I3Q3_POPTR] (536 aa)
       
      0.958
POPTR_0010s11570.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002315814.1] (344 aa)
       
      0.958
POPTR_0008s13510.1
Predicted protein (375 aa)
       
      0.958
POPTR_0001s33890.1
Chromatin remodeling complex subunit [source-UniProtKB/TrEMBL;Acc-B9GJS7_POPTR] (555 aa)
       
      0.958
POPTR_0017s09890.1
Chromatin remodeling complex subunit [source-UniProtKB/TrEMBL;Acc-B9N100_POPTR] (408 aa)
       
      0.957
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
Server load: low (15%) [HD]