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POPTR_0002s24400.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s24400.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s24400.1Predicted protein (136 aa)    
Predicted Functional Partners:
POPTR_0013s06360.1
Predicted protein (280 aa)
     
  0.793
POPTR_0009s15880.1
Predicted protein (278 aa)
     
  0.788
POPTR_0004s20550.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P8M7_POPTR] (278 aa)
     
  0.788
POPTR_0010s25300.1
Predicted protein (277 aa)
     
  0.787
POPTR_0006s23520.1
Predicted protein (322 aa)
     
  0.787
POPTR_0005s16180.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (899 aa)
     
0.717
POPTR_0011s16470.1
Predicted protein (236 aa)
       
 
  0.713
POPTR_0001s46810.1
Predicted protein (236 aa)
       
 
  0.713
POPTR_0002s08930.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (909 aa)
     
0.668
POPTR_0007s13720.1
Coniferyl aldehyde 5-hydroxylase [source-UniProtKB/TrEMBL;Acc-B2Z6Q3_POPTR] (514 aa)
     
 
  0.601
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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