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POPTR_0002s24970.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0002s24970.1" - Peptidylprolyl isomerase in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0002s24970.1Peptidylprolyl isomerase (575 aa)    
Predicted Functional Partners:
POPTR_0006s24330.1
Uncharacterized protein (388 aa)
     
 
  0.927
POPTR_0017s01160.1
Uncharacterized protein (703 aa)
     
 
  0.856
POPTR_0004s07190.1
Uncharacterized protein (703 aa)
     
 
  0.855
POPTR_0003s13180.1
Heat shock protein 90.1 (553 aa)
     
 
  0.852
POPTR_0017s00980.1
DNAJ heat shock N-terminal domain-containing family protein (683 aa)
       
 
  0.834
POPTR_0004s07070.1
DNAJ heat shock N-terminal domain-containing family protein (685 aa)
       
 
  0.834
POPTR_0009s15810.1
Uncharacterized protein (653 aa)
           
  0.679
POPTR_0007s14010.1
Peptidyl-prolyl cis-trans isomerase (82 aa)
     
 
  0.668
POPTR_0018s06080.1
Ethylene-responsive transcriptional coactivator family protein (145 aa)
     
   
  0.648
POPTR_0005s26280.1
Uncharacterized protein; Belongs to the DEAD box helicase family (744 aa)
     
 
  0.630
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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