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POPTR_0003s01450.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s01450.1" - Light-harvesting complex II protein Lhcb6Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s01450.1Light-harvesting complex II protein Lhcb6Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGD4_POPTR] (334 aa)    
Predicted Functional Partners:
POPTR_0001s21740.1
Light-harvesting complex II protein Lhcb6Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PFP4_POPTR] (257 aa)
     
 
 
0.805
POPTR_0018s01720.1
Photosystem I reaction center subunit psaK family protein (130 aa)
     
   
  0.803
POPTR_0006s27030.1
Predicted protein (130 aa)
     
   
  0.799
POPTR_0001s11600.1
Putative uncharacterized protein (224 aa)
     
   
  0.748
POPTR_0015s07340.1
Light-harvesting complex I protein Lhca4 [source-UniProtKB/TrEMBL;Acc-B9N4C4_POPTR] (252 aa)
     
   
0.718
POPTR_0001s41780.1
Light-harvesting complex II protein Lhcb3 [source-UniProtKB/TrEMBL;Acc-B9I013_POPTR] (263 aa)
     
   
0.717
POPTR_0010s22790.1
Light-harvesting complex I protein Lhca1 [source-UniProtKB/TrEMBL;Acc-B9HUE0_POPTR] (243 aa)
     
   
0.713
POPTR_0008s04060.1
Light-harvesting complex I protein Lhca1 [source-UniProtKB/TrEMBL;Acc-B9HLM2_POPTR] (244 aa)
     
   
0.710
POPTR_0019s09140.1
Light-harvesting complex II protein Lhcb5Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGZ3_POPTR] (290 aa)
     
   
0.706
POPTR_0006s10040.1
Light-harvesting complex II protein Lhcb4 [source-UniProtKB/TrEMBL;Acc-B9HCM1_POPTR] (285 aa)
     
   
0.705
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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