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NFC907 protein (Populus trichocarpa) - STRING interaction network
"NFC907" - WD-40 repeat protein MSI4 in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
Databases
Textmining
[Homology]
Score
NFC907WD-40 repeat protein MSI4; Nucleosome/chromatin assembly factor group [source-UniProtKB/TrEMBL;Acc-B9MWS4_POPTR] (465 aa)    
Predicted Functional Partners:
POPTR_0007s12020.1
Uncharacterized protein (458 aa)
     
 
  0.964
POPTR_0005s13910.2
Uncharacterized protein (470 aa)
     
 
  0.964
HAG907
Uncharacterized protein; Histone acetyltransferase [source-UniProtKB/TrEMBL;Acc-B9I6D2_POPTR] (463 aa)
     
 
  0.961
POPTR_0007s03930.1
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (450 aa)
     
 
  0.941
PGE901
FERTILIZATION-INDEPENDENT ENDOSPERM family protein; Polycomb group protein [source-UniProtKB/TrEMBL;Acc-B9I7G3_POPTR] (371 aa)
     
 
  0.936
RBL901
Retinoblastoma-related protein; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity) (1035 aa)
     
 
  0.930
HMGB906
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (610 aa)
     
 
  0.917
HMGB905
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (644 aa)
     
 
  0.917
VEF903
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-B9GYE1_POPTR] (566 aa)
       
 
  0.907
VEF904
Putative uncharacterized protein VEF904 [source-UniProtKB/TrEMBL;Acc-B9GYN4_POPTR] (433 aa)
       
 
  0.907
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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