• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
POPTR_0003s05020.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s05020.1" - Isochorismatase hydrolase family protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s05020.1Isochorismatase hydrolase family protein (197 aa)    
Predicted Functional Partners:
POPTR_0002s10300.1
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family (525 aa)
   
   
  0.898
POPTR_0008s20800.1
ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ATP, which is converted to ADP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration (295 aa)
   
        0.866
POPTR_0008s20790.1
annotation not available (73 aa)
   
        0.866
POPTR_0017s10710.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (388 aa)
   
      0.800
POPTR_0016s04270.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (469 aa)
   
      0.800
POPTR_0013s09410.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (455 aa)
   
      0.800
POPTR_0006s04550.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (456 aa)
   
      0.800
POPTR_0003s20260.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (465 aa)
   
      0.800
POPTR_0001s05820.1
Glycerol-3-phosphate dehydrogenase [NAD(+)] (458 aa)
   
      0.800
SRT901
NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD- dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily (387 aa)
   
 
  0.760
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (11%) [HD]