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POPTR_0003s05110.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s05110.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s05110.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PFT6_POPTR] (144 aa)    
Predicted Functional Partners:
POPTR_0002s25510.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PCY7_POPTR] (166 aa)
     
 
  0.985
POPTR_0008s15100.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PI11_POPTR] (204 aa)
     
 
  0.963
POPTR_0010s09960.1
Putative uncharacterized protein (201 aa)
     
 
  0.962
POPTR_0010s22790.1
Light-harvesting complex I protein Lhca1 [source-UniProtKB/TrEMBL;Acc-B9HUE0_POPTR] (243 aa)
     
 
  0.959
POPTR_0008s04060.1
Light-harvesting complex I protein Lhca1 [source-UniProtKB/TrEMBL;Acc-B9HLM2_POPTR] (244 aa)
     
 
  0.957
POPTR_0015s07340.1
Light-harvesting complex I protein Lhca4 [source-UniProtKB/TrEMBL;Acc-B9N4C4_POPTR] (252 aa)
     
 
  0.919
POPTR_0023s00610.1
Uncharacterized protein (71 aa)
       
 
  0.890
POPTR_0001s11600.1
Putative uncharacterized protein (224 aa)
     
 
  0.880
POPTR_0011s17170.1
Putative uncharacterized protein (159 aa)
     
 
  0.827
POPTR_0005s06420.1
Predicted protein (172 aa)
     
 
  0.812
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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