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POPTR_0003s05270.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s05270.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s05270.1Predicted protein (713 aa)    
Predicted Functional Partners:
POPTR_0010s06530.1
Predicted protein (207 aa)
     
  0.803
POPTR_0008s17970.1
Predicted protein (267 aa)
     
  0.803
POPTR_0014s09060.1
Tubulin gamma-2 chain [source-UniProtKB/TrEMBL;Acc-B9GQG6_POPTR]; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)
     
  0.799
POPTR_0002s16930.1
Tubulin gamma-2 chain (TUBG2), mRNA [source-RefSeq DNA_predicted;Acc-XM_002302580.1]; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (443 aa)
     
  0.794
POPTR_0007s01020.1
Predicted protein (442 aa)
     
  0.781
POPTR_0017s11950.1
Condensin complex components subunit [source-UniProtKB/TrEMBL;Acc-B9IJY0_POPTR] (1300 aa)
     
  0.742
POPTR_0005s26230.1
Predicted protein (300 aa)
     
 
  0.741
POPTR_0003s04880.1
Predicted protein (72 aa)
     
 
  0.741
POPTR_0002s11650.1
Kinesin-like protein (208 aa)
     
 
  0.741
POPTR_0002s02210.1
Uncharacterized protein (250 aa)
     
 
  0.741
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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