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POPTR_0003s05490.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s05490.1" - Sulfate transporter 3.4 family protein in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
POPTR_0003s05490.1Sulfate transporter 3.4 family protein; Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 (628 aa)    
Predicted Functional Partners:
POPTR_0009s11820.1
ERECTA-LIKE 4 family protein (377 aa)
           
  0.671
POPTR_0004s16110.1
ERECTA-LIKE 4 family protein (377 aa)
           
  0.671
POPTR_0010s09140.1
Uncharacterized protein (462 aa)
     
   
  0.662
POPTR_0008s15880.1
ATP sulfurylase family protein (462 aa)
     
   
  0.650
POPTR_0005s25850.1
Uncharacterized protein (481 aa)
     
   
  0.650
POPTR_0002s02580.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGH4_POPTR] (477 aa)
     
   
  0.650
POPTR_0006s24440.1
Uncharacterized protein (482 aa)
           
  0.598
POPTR_0001s47660.1
Chloride channel protein; Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PF31_POPTR] (779 aa)
         
  0.582
POPTR_0014s15240.1
Uncharacterized protein (411 aa)
   
   
  0.573
POPTR_0004s01220.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEF8_POPTR] (465 aa)
   
   
  0.573
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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