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STRINGSTRING
MYB129 protein (Populus trichocarpa) - STRING interaction network
"MYB129" - Predicted protein [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYB129Predicted protein [source-UniProtKB/TrEMBL;Acc-B9GYD5_POPTR] (180 aa)    
Predicted Functional Partners:
POPTR_0018s09830.1
Uncharacterized protein (262 aa)
       
 
  0.789
POPTR_0001s28740.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PGU0_POPTR] (371 aa)
       
 
  0.764
POPTR_0014s13990.1
Uncharacterized protein; Belongs to the protein kinase superfamily (398 aa)
       
 
  0.746
POPTR_0014s05160.1
Uncharacterized protein; Belongs to the protein kinase superfamily (433 aa)
       
 
  0.746
POPTR_0003s08340.1
Uncharacterized protein; Belongs to the protein kinase superfamily (409 aa)
       
 
  0.735
POPTR_0003s03310.1
Kinase family protein; Belongs to the protein kinase superfamily (388 aa)
       
 
  0.735
POPTR_0014s17740.1
Uncharacterized protein (505 aa)
           
  0.729
POPTR_0003s08720.1
Kinase family protein (502 aa)
           
  0.729
POPTR_0010s19270.1
Uncharacterized protein (649 aa)
       
 
  0.698
POPTR_0009s07920.1
Uncharacterized protein (677 aa)
       
 
  0.685
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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