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POPTR_0003s08080.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s08080.1" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
POPTR_0003s08080.1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PFA9_POPTR] (540 aa)    
Predicted Functional Partners:
POPTR_0002s12760.1
Uncharacterized protein (249 aa)
           
  0.741
POPTR_0001s30570.1
Homeobox family protein (930 aa)
     
 
  0.671
POPTR_0009s09600.1
Uncharacterized protein (934 aa)
     
 
  0.662
POPTR_0009s04730.1
Syringolide-induced protein 1-3-1B (308 aa)
     
 
  0.609
POPTR_0007s08530.1
Uncharacterized protein (217 aa)
       
 
  0.603
POPTR_0001s25590.1
Uncharacterized protein (306 aa)
       
 
  0.603
POPTR_0003s07560.1
Uncharacterized protein (387 aa)
           
  0.599
POPTR_0001s15660.1
Uncharacterized protein (385 aa)
           
  0.599
POPTR_0001s02150.1
Uncharacterized protein (303 aa)
           
  0.597
POPTR_0003s15490.1
Leucine-rich repeat transmembrane protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (1254 aa)
           
  0.594
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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