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POPTR_0003s08360.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s08360.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s08360.1Predicted protein (548 aa)    
Predicted Functional Partners:
POPTR_0016s02870.1
Hypothetical protein (975 aa)
     
 
  0.931
POPTR_0006s03020.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PAJ0_POPTR] (992 aa)
     
 
  0.931
POPTR_0007s06550.1
Predicted protein (574 aa)
         
  0.931
POPTR_0009s04650.1
Predicted protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (853 aa)
     
 
  0.905
POPTR_0001s36980.1
Predicted protein (571 aa)
         
  0.903
POPTR_0515s00220.1
Predicted protein (423 aa)
         
  0.903
POPTR_0014s02940.1
Predicted protein (423 aa)
         
  0.903
POPTR_0002s01570.1
Predicted protein (410 aa)
         
  0.903
POPTR_0006s11620.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002326378.1] (540 aa)
         
  0.900
POPTR_0010s16770.1
Predicted protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (953 aa)
         
  0.900
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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