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POPTR_0003s08420.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s08420.1" - Lon protease homolog 2, peroxisomal in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
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POPTR_0003s08420.1Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import (893 aa)    
Predicted Functional Partners:
POPTR_0015s13460.1
Uncharacterized protein (146 aa)
       
      0.830
CKS1
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (129 aa)
       
      0.808
POPTR_0004s23830.1
Uncharacterized protein (345 aa)
 
 
  0.804
POPTR_0015s01520.1
Uncharacterized protein (572 aa)
 
 
  0.794
POPTR_0012s02260.1
Uncharacterized protein (557 aa)
 
 
  0.793
POPTR_0013s09570.1
annotation not available (503 aa)
 
 
  0.787
POPTR_0013s09560.1
annotation not available (187 aa)
   
 
  0.784
POPTR_0004s23840.1
annotation not available (208 aa)
   
 
  0.784
POPTR_0014s03570.1
Uncharacterized protein (362 aa)
         
  0.748
POPTR_0003s17850.1
PRECOCIOUS family protein (1067 aa)
           
  0.741
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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