STRINGSTRING
POPTR_0003s08940.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s08940.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Databases
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[Homology]
Score
POPTR_0003s08940.1Predicted protein (438 aa)    
Predicted Functional Partners:
POPTR_0009s15250.1
Predicted protein (1018 aa)
     
  0.994
POPTR_0004s20100.1
Predicted protein (1014 aa)
     
  0.994
POPTR_0005s25990.1
Predicted protein (142 aa)
     
  0.992
POPTR_0002s02450.1
Predicted protein (142 aa)
     
  0.992
POPTR_0003s13040.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PH57_POPTR]; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (904 aa)
     
  0.958
POPTR_0001s09660.1
Predicted protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (904 aa)
     
  0.958
POPTR_0006s25970.1
Predicted protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules (842 aa)
     
  0.953
POPTR_2006s00200.1
Uncharacterized protein (143 aa)
     
  0.951
POPTR_0006s15350.1
Predicted protein (143 aa)
     
  0.917
POPTR_0006s28810.1
Predicted protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (949 aa)
     
  0.917
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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