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POPTR_0003s09880.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s09880.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s09880.1Uncharacterized protein; 4-coumarate-coa ligase [source-UniProtKB/TrEMBL;Acc-B9GZT7_POPTR] (557 aa)    
Predicted Functional Partners:
POPTR_0001s14980.1
Uncharacterized protein (88 aa)
         
  0.909
POPTR_0001s14950.1
Uncharacterized protein (166 aa)
         
  0.909
POPTR_0001s14940.1
annotation not available (201 aa)
         
  0.909
POPTR_0001s14890.1
Uncharacterized protein (337 aa)
         
  0.909
CCR2
Uncharacterized protein; Cinnamoyl CoA reductase [source-UniProtKB/TrEMBL;Acc-B9N9Z0_POPTR] (337 aa)
         
  0.909
CCR5
Uncharacterized protein; Cinnamoyl CoA reductase [source-UniProtKB/TrEMBL;Acc-B9GMB4_POPTR] (342 aa)
         
  0.883
POPTR_0019s15110.1
Cytochrome P450Trans-cinnamate 4-hydroxylaseTrans-cinnamate 4-monooxygenase [source-UniProtKB/TrEMBL;Acc-B2Z6P4_POPTR] (505 aa)
     
 
  0.881
CCR1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9I5M6_POPTR] (341 aa)
         
  0.881
COMT1
Caffeic acid 3-O-methyltransferase [source-UniProtKB/TrEMBL;Acc-B2Z6Q7_POPTR]; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family (364 aa)
         
  0.874
COMT2
Caffeic acid 3-O-methyltransferaseCaffeic acid 3-O-methyltransferase 1Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9P830_POPTR]; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family (364 aa)
         
  0.873
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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