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POPTR_0003s10610.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s10610.1" - 2-oxoglutarate-dependent dioxygenase [source:UniProtKB/TrEMBL in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s10610.12-oxoglutarate-dependent dioxygenase [source-UniProtKB/TrEMBL;Acc-B9H064_POPTR] (360 aa)    
Predicted Functional Partners:
POPTR_0005s16180.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (899 aa)
     
   
  0.520
POPTR_0002s08930.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (909 aa)
     
   
  0.518
POPTR_0018s05230.1
Predicted protein (200 aa)
              0.451
POPTR_0017s06480.1
Predicted protein (100 aa)
              0.451
POPTR_0011s13810.1
Predicted protein (113 aa)
              0.451
POPTR_0010s16160.1
Predicted protein (108 aa)
              0.451
POPTR_0007s02530.1
Predicted protein (113 aa)
              0.451
POPTR_0007s02520.1
Predicted protein (113 aa)
              0.451
POPTR_0006s24450.1
Predicted protein (200 aa)
              0.451
POPTR_0001s44450.1
Predicted protein (125 aa)
              0.451
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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