• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
POPTR_0003s11410.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s11410.1" - Uncharacterized protein in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s11410.1Uncharacterized protein (434 aa)    
Predicted Functional Partners:
POPTR_0002s07790.1
Uncharacterized protein (522 aa)
   
 
  0.922
POPTR_0002s10420.1
Glucose-6-phosphate isomerase; Belongs to the GPI family (616 aa)
         
  0.889
POPTR_0846s00200.1
annotation not available (149 aa)
   
 
  0.856
POPTR_0019s05000.1
Uncharacterized protein (345 aa)
   
 
  0.856
POPTR_0006s24940.1
Uncharacterized protein (348 aa)
   
 
  0.856
POPTR_0008s11770.1
Glucose-6-phosphate isomerase; Belongs to the GPI family (568 aa)
         
  0.832
POPTR_0002s26300.1
Uncharacterized protein (165 aa)
         
  0.832
POPTR_0017s02060.1
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (829 aa)
   
 
  0.824
POPTR_0015s05540.1
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (922 aa)
   
 
  0.824
POPTR_0012s03420.1
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways (800 aa)
   
 
  0.824
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
Server load: low (6%) [HD]