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STRINGSTRING
MYB128 protein (Populus trichocarpa) - STRING interaction network
"MYB128" - Predicted protein [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYB128Predicted protein [source-UniProtKB/TrEMBL;Acc-B9GWV1_POPTR] (311 aa)    
Predicted Functional Partners:
POPTR_0002s25970.1
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily (1042 aa)
     
 
  0.889
POPTR_0001s08550.1
annotation not available (187 aa)
     
 
  0.766
POPTR_0001s08540.1
annotation not available (148 aa)
     
 
  0.759
POPTR_0005s05970.1
Glycosyl transferase family 48 family protein (1906 aa)
           
  0.737
POPTR_0004s02920.1
Uncharacterized protein; Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (277 aa)
           
  0.730
POPTR_0003s07180.1
Zinc finger family protein (384 aa)
     
   
  0.708
POPTR_0001s16080.1
Uncharacterized protein (367 aa)
     
   
  0.708
POPTR_0012s08910.1
annotation not available (223 aa)
     
 
  0.690
NAC049
NAC domain protein, IPR003441 [source-UniProtKB/TrEMBL;Acc-B9HUM1_POPTR] (556 aa)
           
  0.682
POPTR_0019s11330.1
Uncharacterized protein; Wood-associated NAC domain transcription factor 6B [source-UniProtKB/TrEMBL;Acc-E5KUI2_POPTR] (307 aa)
           
  0.681
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: P. trichocarpa, Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. & A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, black cottonwood, western balsam poplar
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