STRINGSTRING
POPTR_0003s13690.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s13690.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s13690.1Predicted protein (752 aa)    
Predicted Functional Partners:
POPTR_0010s19230.1
Predicted protein (384 aa)
     
  0.781
POPTR_0008s07250.1
Predicted protein (343 aa)
       
  0.773
POPTR_0014s15740.1
Predicted protein (672 aa)
     
0.709
POPTR_0014s06540.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PHU5_POPTR]; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (223 aa)
         
  0.631
POPTR_0002s14930.1
Predicted protein; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (223 aa)
         
  0.631
POPTR_1510s00200.1
Predicted protein (197 aa)
     
 
  0.589
POPTR_0019s15180.1
Predicted protein (271 aa)
     
 
  0.589
POPTR_0013s15430.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PI50_POPTR] (270 aa)
     
 
  0.589
POPTR_0002s09730.1
Predicted protein (681 aa)
     
 
  0.554
POPTR_0010s15600.1
Photochrome B2 [source-UniProtKB/TrEMBL;Acc-D2TE99_POPTR]; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1134 aa)
     
 
  0.553
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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