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GH9C2 protein (Populus trichocarpa) - STRING interaction network
"GH9C2" - Putative uncharacterized protein [source:UniProtKB/TrEMBL in Populus trichocarpa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GH9C2Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PIJ6_POPTR] (622 aa)    
Predicted Functional Partners:
POPTR_0004s01410.1
Predicted protein (1092 aa)
           
  0.499
POPTR_0007s04170.1
Predicted protein (445 aa)
         
  0.497
POPTR_0005s06430.1
Predicted protein (490 aa)
         
  0.497
POPTR_0002s11370.1
Uncharacterized protein (750 aa)
 
   
  0.431
POPTR_0009s09090.1
Predicted protein (575 aa)
 
   
  0.422
POPTR_0009s09080.1
Predicted protein (542 aa)
 
   
  0.421
POPTR_0009s09070.1
Predicted protein (508 aa)
 
   
  0.420
POPTR_0009s09100.1
Predicted protein (554 aa)
 
   
  0.416
POPTR_0003s13920.1
Predicted protein (373 aa)
           
  0.414
POPTR_0001s10550.1
Predicted protein (373 aa)
           
  0.414
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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