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POPTR_0003s15220.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s15220.1" - Predicted protein in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s15220.1Predicted protein (584 aa)    
Predicted Functional Partners:
POPTR_0001s25490.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
  0.990
POPTR_0009s04560.1
Predicted protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.989
POPTR_0009s09740.1
Predicted protein (1191 aa)
     
0.986
POPTR_0013s02320.1
Predicted protein (1855 aa)
     
  0.981
POPTR_0001s43000.1
Predicted protein (207 aa)
       
  0.980
POPTR_0004s20080.1
Uncharacterized protein (1037 aa)
     
 
  0.959
POPTR_0015s12320.1
Predicted protein, mRNA [source-RefSeq DNA_predicted;Acc-XM_002322281.1] (156 aa)
       
  0.956
POPTR_0014s11040.1
Predicted protein (156 aa)
       
  0.956
POPTR_0007s10880.1
Predicted protein (1536 aa)
     
  0.954
POPTR_0001s17320.1
Predicted protein (353 aa)
       
  0.954
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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