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POPTR_0003s18740.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0003s18740.1" - SET domain protein [source:UniProtKB/TrEMBL in Populus trichocarpa
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0003s18740.1SET domain protein [source-UniProtKB/TrEMBL;Acc-B9GXL1_POPTR] (653 aa)    
Predicted Functional Partners:
POPTR_0019s00240.1
DNA (cytosine-5)-methyltransferase AthI family protein (1576 aa)
   
  0.966
POPTR_0004s14140.1
DNA methyltransferase [source-UniProtKB/TrEMBL;Acc-B9H419_POPTR] (1529 aa)
   
  0.966
POPTR_0006s26700.1
Hypothetical protein (380 aa)
   
  0.964
POPTR_0003s09920.1
Uncharacterized protein (972 aa)
   
  0.964
POPTR_0001s04700.1
DNA methyltransferase [source-UniProtKB/TrEMBL;Acc-B9GLJ3_POPTR] (970 aa)
   
  0.964
POPTR_0019s06120.1
Hypothetical protein (389 aa)
     
  0.932
POPTR_1112s00210.1
Histone H3 (99 aa)
     
  0.922
POPTR_0108s00230.1
Putative uncharacterized protein (84 aa)
     
  0.922
POPTR_0014s09260.1
Histone H3 [source-UniProtKB/TrEMBL;Acc-A9P905_POPTR] (136 aa)
     
  0.922
POPTR_0014s09210.1
Histone H3 [source-UniProtKB/TrEMBL;Acc-B9I8W1_POPTR] (129 aa)
     
  0.922
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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