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TOP6B protein (Populus trichocarpa) - STRING interaction network
"TOP6B" - DNA topoisomerase 6 subunit B in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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[Homology]
Score
TOP6BDNA topoisomerase 6 subunit B ; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP (673 aa)    
Predicted Functional Partners:
TOP6A
Predicted protein; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (423 aa)
 
 
  0.988
POPTR_0001s09890.1
Uncharacterized protein (331 aa)
 
 
  0.982
POPTR_0001s37540.1
Predicted protein (365 aa)
   
 
  0.975
POPTR_0009s06380.1
Predicted protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1482 aa)
   
   
  0.656
POPTR_0001s27120.1
Predicted protein; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1485 aa)
   
   
  0.656
POPTR_0004s06800.1
Predicted protein (443 aa)
           
  0.524
POPTR_0007s08410.1
Predicted protein; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
   
        0.484
POPTR_0019s10010.1
Predicted protein (885 aa)
   
        0.483
POPTR_0015s05140.1
Predicted protein (819 aa)
     
   
  0.471
POPTR_0011s16880.1
Predicted protein (221 aa)
   
        0.467
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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