STRINGSTRING
POPTR_0004s03390.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s03390.1" - Predicted protein in Populus trichocarpa
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0004s03390.1Predicted protein (102 aa)    
Predicted Functional Partners:
POPTR_0010s11900.1
Hypothetical protein (103 aa)
           
  0.653
POPTR_0008s13230.1
Predicted protein (77 aa)
           
  0.653
POPTR_1455s00210.1
Uncharacterized protein (131 aa)
     
  0.649
POPTR_1455s00200.1
Tubulin, beta chain [source-UniProtKB/TrEMBL;Acc-B9HNJ2_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
  0.649
POPTR_1327s00200.1
Uncharacterized protein (273 aa)
     
  0.649
POPTR_0016s11660.1
Tubulin, beta chain [source-UniProtKB/TrEMBL;Acc-B9HCI0_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (443 aa)
     
  0.649
POPTR_0016s03300.1
Tubulin, beta chain [source-UniProtKB/TrEMBL;Acc-A9PEU3_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (450 aa)
     
  0.649
POPTR_0015s04560.1
Tubulin, beta chain [source-UniProtKB/TrEMBL;Acc-B9IEC1_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (444 aa)
     
  0.649
POPTR_0012s04500.1
Tubulin beta chain [source-UniProtKB/TrEMBL;Acc-B9I2F1_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (444 aa)
     
  0.649
POPTR_0011s16520.1
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-A9PEU0_POPTR]; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (445 aa)
     
  0.649
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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