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POPTR_0004s04900.1 protein (Populus trichocarpa) - STRING interaction network
"POPTR_0004s04900.1" - NAC domain protein, IPR003441 [source:UniProtKB/TrEMBL in Populus trichocarpa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POPTR_0004s04900.1NAC domain protein, IPR003441 [source-UniProtKB/TrEMBL;Acc-B9H2Q1_POPTR] (313 aa)    
Predicted Functional Partners:
POPTR_0004s05830.1
Cellulose synthase (1014 aa)
     
   
  0.540
POPTR_0001s27430.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9GFE8_POPTR] (327 aa)
     
   
  0.535
POPTR_0009s05860.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9HNW3_POPTR] (321 aa)
           
  0.530
POPTR_0001s26590.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9GF09_POPTR] (281 aa)
           
  0.530
POPTR_0011s07040.1
Cellulose synthase (978 aa)
     
   
  0.528
MYB20
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9HNP3_POPTR] (333 aa)
     
   
  0.524
POPTR_0007s08190.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9HGV5_POPTR] (367 aa)
           
  0.499
POPTR_0005s09930.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9H624_POPTR] (367 aa)
           
  0.499
POPTR_0001s07830.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9N3N5_POPTR] (270 aa)
     
   
  0.476
POPTR_0012s14540.1
Predicted protein [source-UniProtKB/TrEMBL;Acc-B9I4L5_POPTR] (276 aa)
     
   
  0.470
Your Current Organism:
Populus trichocarpa
NCBI taxonomy Id: 3694
Other names: Balanopales, Euphorbiales, Flacourtiaceae, Linales, Malpighiales, P. trichocarpa, Populus, Populus L., Populus balsamifera subsp. trichocarpa, Populus balsamifera subsp. trichocarpa (Torr. et A.Gray) Brayshaw, Populus trichocarpa, Populus trichocarpa Torr. & A.Gray, Populus trichocarpa Torr. et A.Gray, Rhizophorales, Salicaceae, Saliceae, Violales, Violanae, black cottonwood, poplar, poplar trees, poplars, western balsam poplar, willow family
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